#!/bin/bash
set -e

pkg=any2fasta

export LC_ALL=C.UTF-8
if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
  trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
fi

cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}"

cd "${AUTOPKGTEST_TMP}"

for i in test* ; do
  if echo $i | grep -q noseq ; then
    # if name contains noseq the script should fail
    set +e
    ${pkg} $i
    ret=$?
    echo $ret
    if [ $ret -ne 0 ]; then
        echo "Passed"
    fi
    set -e
  else
    ${pkg} $i > test.fasta
  fi
done
