Author: Michael R. Crusoe <crusoe@debian.org>
Description: Use the packaged version of seqan3
Forwarded: not-needed
--- seqan-raptor.orig/lib/chopper/CMakeLists.txt
+++ seqan-raptor/lib/chopper/CMakeLists.txt
@@ -60,7 +60,7 @@
 find_package (SeqAn3 REQUIRED QUIET HINTS ${CHOPPER_SUBMODULES_DIR}/seqan3/build_system)
 
 # Allow to include CMake scripts from seqan3.
-list (APPEND CMAKE_MODULE_PATH "${SEQAN3_CLONE_DIR}/test/cmake/")
+list (APPEND CMAKE_MODULE_PATH "/usr/include/seqan3/test/cmake/")
 list (APPEND CMAKE_MODULE_PATH "${CMAKE_CURRENT_LIST_DIR}/test/cmake/")
 
 # Define cmake configuration flags to configure and build external projects with the same flags as specified for
--- seqan-raptor.orig/src/CMakeLists.txt
+++ seqan-raptor/src/CMakeLists.txt
@@ -15,7 +15,7 @@
 
 FetchContent_Declare (raptor_chopper_project SOURCE_DIR "${RAPTOR_SUBMODULES_DIR}/chopper")
 
-set (SEQAN3_SUBMODULES_DIR "${RAPTOR_SUBMODULES_DIR}")
+set (SEQAN3_SUBMODULES_DIR "/usr/include/seqan3/submodules")
 set (CHOPPER_SUBMODULES_DIR
      "${RAPTOR_SUBMODULES_DIR}"
      CACHE STRING "Directory containing submodules."
